PDBsum entry 1oq7 Go to PDB code:  Tunnel analysis for: 1oq7 calculated with MOLE 2.0 PDB id 1oq7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 2.81 37.7 -0.71 0.06 9.3 79 2 4 2 3 6 1 0   2 1.25 1.25 40.7 -0.41 0.02 9.0 76 2 4 2 5 7 1 0   3 1.63 2.80 44.2 -0.81 -0.03 10.2 81 2 4 2 3 5 1 0   4 1.66 2.82 38.3 -0.73 0.03 9.4 79 2 4 2 3 6 1 0   5 1.12 1.12 40.2 -1.31 -0.42 18.3 83 4 2 1 6 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.