PDBsum entry 1omp Go to PDB code:  Tunnel analysis for: 1omp calculated with MOLE 2.0 PDB id 1omp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.61 15.6 -1.01 -0.03 6.0 83 1 0 3 2 2 0 0   2 1.30 1.58 16.5 -1.11 -0.04 6.6 84 2 0 3 2 2 0 0   3 1.28 1.28 15.5 1.91 0.47 6.0 82 1 0 0 6 0 0 0   4 1.56 1.56 17.9 1.26 0.20 4.4 89 0 1 2 7 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.