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PDBsum entry 1olm

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1olm calculated with MOLE 2.0 PDB id
1olm
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.10 1.35 25.1 -1.26 -0.36 12.9 75 1 2 2 2 2 1 0  
2 1.13 1.12 36.9 -2.12 -0.60 23.3 92 5 3 6 2 1 1 0  
3 2.38 3.87 61.1 -2.38 -0.70 29.9 84 7 7 3 0 0 0 1  
4 1.22 2.19 80.3 0.32 0.31 10.4 78 6 4 4 17 7 0 2  VTQ 1398 E
5 1.38 1.47 88.6 -1.76 -0.33 26.0 78 8 9 7 6 5 1 1  
6 1.29 2.13 97.1 0.51 0.47 10.8 76 6 4 6 20 8 1 2  VTQ 1323 C
7 1.28 1.58 124.0 -0.26 0.18 16.3 74 9 9 4 19 9 2 3  VTQ 1323 C
8 1.26 1.26 131.1 0.26 0.37 12.9 73 13 5 3 24 10 1 2  VTQ 1323 C VTQ 1398 E
9 1.24 1.69 37.8 -2.92 -0.72 36.3 84 4 4 1 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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