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PDBsum entry 1ogc

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 1ogc calculated with MOLE 2.0 PDB id
1ogc
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 1.43 28.7 -0.91 -0.30 18.1 80 3 1 0 3 0 1 0  CL 1133 D
2 1.17 1.47 33.0 -0.81 -0.22 18.7 83 5 4 0 5 0 2 0  
3 1.21 1.21 158.4 -1.08 -0.34 22.2 77 12 11 2 14 2 3 0  
4 1.26 1.40 156.0 -1.62 -0.48 27.7 78 10 14 2 8 2 1 0  
5 2.15 2.04 211.3 -1.32 -0.41 24.6 77 13 16 3 13 3 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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