PDBsum entry 1ogc Go to PDB code:  Tunnel analysis for: 1ogc calculated with MOLE 2.0 PDB id 1ogc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 2.04 16.2 -0.95 -0.28 24.8 87 2 2 0 2 0 0 0   2 1.39 1.44 17.5 -1.38 -0.36 22.9 81 2 0 0 3 0 0 0   3 1.40 1.40 26.3 -1.06 -0.21 20.9 81 3 0 0 4 0 1 0  CL 1133 D 4 1.25 1.50 30.3 -0.87 -0.15 19.1 79 6 3 0 5 0 2 0   5 1.05 1.38 15.0 1.18 0.68 9.7 78 2 1 0 5 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.