PDBsum entry 1odg Go to PDB code:  Tunnel analysis for: 1odg calculated with MOLE 2.0 PDB id 1odg Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.59 25.0 0.25 -0.18 11.2 83 1 2 0 5 0 0 0  DT 1 F DG 3 F DT 1 W DA 2 W DG 3 W DG 4 W 2 1.22 1.22 34.2 -0.30 -0.26 15.2 82 2 2 0 5 0 0 0  DA 2 F DG 3 F DT 1 W DA 2 W DA 10 W 3 1.43 1.59 35.2 0.22 -0.07 11.7 77 1 2 0 6 1 0 0  DG 4 F DC 5 F DT 1 W DA 2 W DG 3 W DG 8 W 4 1.41 1.59 43.9 -0.89 -0.38 18.2 81 4 5 1 4 1 0 0  DC 12 F DT 1 W DA 2 W 5 1.32 2.34 56.0 -0.44 -0.11 17.6 80 4 5 2 8 2 0 0  DT 1 W DA 2 W Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.