PDBsum entry 1od2 Go to PDB code:  Pore analysis for: 1od2 calculated with MOLE 2.0 PDB id 1od2 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 2.48 31.0 -1.08 -0.24 13.9 86 2 1 6 8 1 3 0   2 2.41 2.85 31.8 0.09 -0.30 8.9 90 5 1 2 9 0 4 0  MSE 1765 A ACO 3203 A 3 1.58 2.58 90.5 -0.94 -0.35 11.3 85 7 3 10 15 1 8 0  MSE 1765 B 4 2.01 2.14 91.2 -1.10 -0.43 11.7 85 7 3 11 18 0 7 0  MSE 1765 B 5 1.41 3.73 119.1 -0.51 -0.11 16.0 84 13 8 6 28 3 7 0  MSE 1631 A ACO 3203 A MSE 2014 B MSE 2030 B MSE 2103 B 6 1.31 1.53 44.0 -0.11 -0.07 12.9 83 7 4 2 15 3 3 0  MSE 2014 A MSE 2030 A MSE 2103 A MSE 1631 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.