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PDBsum entry 1o2a

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Pore analysis for: 1o2a calculated with MOLE 2.0 PDB id
1o2a
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.59 1.77 49.9 -2.25 -0.39 24.6 77 9 2 4 1 4 0 0  FAD 700 D
2 2.25 3.25 64.2 -1.72 -0.14 23.0 85 14 0 6 5 3 0 0  FAD 710 B FAD 700 D
3 2.04 3.78 70.8 -0.52 0.11 18.7 91 13 0 7 6 1 0 0  FAD 715 A FAD 710 B FAD 700 D
4 1.62 1.60 76.4 -0.50 0.06 16.8 88 11 0 6 7 2 0 0  FAD 715 A FAD 710 B FAD 700 D
5 2.05 3.76 90.2 -0.85 0.17 21.8 86 15 1 6 6 3 0 0  FAD 715 A FAD 710 B
6 2.33 3.23 92.4 -1.82 -0.09 24.6 83 16 1 6 5 5 0 0  FAD 710 B FAD 700 D
7 1.24 1.19 94.2 -1.41 -0.33 22.4 81 17 2 6 7 1 0 0  FAD 715 A FAD 705 C
8 1.14 1.22 97.3 -0.48 0.08 17.9 87 16 0 9 11 2 0 0  FAD 710 B FAD 705 C FAD 700 D
9 1.25 1.47 139.5 -1.09 -0.14 19.6 75 14 4 6 8 6 1 0  FAD 715 A FAD 705 C
10 1.31 1.53 157.6 -0.42 0.17 14.8 83 18 1 11 13 6 0 0  FAD 710 B FAD 705 C FAD 700 D
11 1.28 1.50 161.1 -0.79 0.16 17.0 81 21 1 10 14 7 0 0  FAD 705 C FAD 700 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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