spacer
spacer

PDBsum entry 1o1h

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1o1h calculated with MOLE 2.0 PDB id
1o1h
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.41 3.48 27.9 -2.18 -0.15 21.5 74 4 3 2 0 3 3 0  MPD 1016 B
2 1.84 1.87 105.1 -1.57 -0.18 23.1 75 8 7 2 4 5 2 0  
3 1.85 1.99 105.5 -1.55 -0.28 21.3 76 8 6 4 4 5 3 0  MPD 1016 B
4 1.85 1.85 77.4 -1.39 -0.28 21.3 75 6 5 1 4 3 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer