 |
PDBsum entry 1nx9
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 1nx9 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
1nx9
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.15 |
3.19 |
32.1 |
-1.18 |
-0.22 |
11.6 |
75 |
|
3 |
2 |
3 |
2 |
5 |
1 |
0 |
|
|
 |
|
2 |
 |
1.47 |
1.80 |
29.4 |
-0.06 |
0.24 |
10.5 |
76 |
2 |
1 |
1 |
5 |
2 |
2 |
0 |
|
|
3 |
 |
1.13 |
3.30 |
35.1 |
-0.92 |
-0.23 |
10.7 |
75 |
2 |
2 |
3 |
2 |
5 |
1 |
0 |
|
 |
4 |
 |
1.21 |
3.29 |
32.6 |
-1.16 |
-0.30 |
12.8 |
75 |
3 |
2 |
3 |
2 |
5 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program