PDBsum entry 1nqp Go to PDB code:  Pore analysis for: 1nqp calculated with MOLE 2.0 PDB id 1nqp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.91 2.21 54.4 -1.60 -0.22 19.8 80 6 5 2 5 3 5 0   2 1.23 1.23 61.5 -0.78 0.10 17.2 76 8 5 4 11 6 3 0  HEM 348 B 3 1.78 1.92 66.3 -1.68 -0.08 20.2 79 7 8 2 6 4 5 0   4 1.17 1.16 68.3 0.03 0.14 13.8 77 5 4 2 14 4 3 0  HEM 348 B 5 1.17 1.15 80.9 -0.87 -0.11 18.4 80 7 4 4 15 4 5 0  HEM 348 B 6 1.87 1.78 85.2 -1.63 -0.27 21.3 80 7 7 2 8 3 7 0   7 1.67 3.03 169.4 -1.39 -0.14 20.5 79 15 10 5 9 7 5 0  HEM 748 D 8 1.19 1.22 173.6 -0.43 0.02 17.6 78 14 6 5 17 7 3 0  HEM 348 B HEM 748 D 9 1.56 2.50 174.1 -1.12 -0.15 20.3 80 12 9 3 12 5 4 0  HEM 748 D 10 1.46 3.10 191.7 -0.69 -0.04 20.4 77 16 9 5 19 8 4 0  HEM 544 C HEM 748 D 11 1.48 2.90 190.5 -1.35 -0.25 20.9 81 15 9 5 12 6 7 0  HEM 748 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.