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PDBsum entry 1nhc

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Pore analysis for: 1nhc calculated with MOLE 2.0 PDB id
1nhc
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.17 2.17 30.8 -1.74 -0.79 23.1 92 1 7 3 1 0 0 0  
2 3.10 4.80 35.8 -2.27 -0.77 24.6 91 3 8 5 1 0 0 0  
3 2.89 2.89 35.9 -2.41 -0.90 25.3 95 1 9 7 0 0 0 0  
4 3.00 3.14 42.9 -1.87 -0.91 19.6 95 1 7 5 0 0 0 0  
5 2.17 2.17 43.6 -2.27 -0.78 25.0 95 2 7 5 1 0 0 0  
6 1.92 2.18 45.7 -3.04 -0.74 34.5 87 4 6 3 0 0 0 0  NAG 1 H NAG 2 H BMA 3 H MAN 4 H MAN 6 H
7 2.06 2.06 50.0 -0.94 -0.79 9.7 97 0 4 5 1 1 0 0  
8 2.67 2.81 54.7 -2.10 -0.60 21.3 87 8 4 7 0 1 1 0  SO4 404 D
9 2.57 2.57 61.3 -1.65 -0.88 16.1 98 0 9 6 0 0 0 0  
10 2.07 2.07 63.3 -1.21 -0.82 10.1 95 2 6 5 1 0 0 0  
11 2.27 2.26 68.9 -2.24 -0.68 23.5 88 8 7 9 1 1 2 0  SO4 404 D
12 2.04 2.04 73.8 -1.07 -0.78 9.5 96 0 9 6 2 1 0 0  
13 2.24 2.27 79.8 -2.17 -0.68 21.5 90 9 8 11 2 1 2 0  SO4 404 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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