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PDBsum entry 1nhc
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Pore analysis for: 1nhc calculated with MOLE 2.0
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PDB id
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1nhc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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13 pores,
coloured by radius
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13 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.17 |
2.17 |
30.8 |
-1.74 |
-0.79 |
23.1 |
92 |
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1 |
7 |
3 |
1 |
0 |
0 |
0 |
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2 |
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3.10 |
4.80 |
35.8 |
-2.27 |
-0.77 |
24.6 |
91 |
3 |
8 |
5 |
1 |
0 |
0 |
0 |
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3 |
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2.89 |
2.89 |
35.9 |
-2.41 |
-0.90 |
25.3 |
95 |
1 |
9 |
7 |
0 |
0 |
0 |
0 |
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4 |
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3.00 |
3.14 |
42.9 |
-1.87 |
-0.91 |
19.6 |
95 |
1 |
7 |
5 |
0 |
0 |
0 |
0 |
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5 |
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2.17 |
2.17 |
43.6 |
-2.27 |
-0.78 |
25.0 |
95 |
2 |
7 |
5 |
1 |
0 |
0 |
0 |
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6 |
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1.92 |
2.18 |
45.7 |
-3.04 |
-0.74 |
34.5 |
87 |
4 |
6 |
3 |
0 |
0 |
0 |
0 |
NAG 1 H NAG 2 H BMA 3 H MAN 4 H MAN 6 H
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7 |
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2.06 |
2.06 |
50.0 |
-0.94 |
-0.79 |
9.7 |
97 |
0 |
4 |
5 |
1 |
1 |
0 |
0 |
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8 |
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2.67 |
2.81 |
54.7 |
-2.10 |
-0.60 |
21.3 |
87 |
8 |
4 |
7 |
0 |
1 |
1 |
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SO4 404 D
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9 |
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2.57 |
2.57 |
61.3 |
-1.65 |
-0.88 |
16.1 |
98 |
0 |
9 |
6 |
0 |
0 |
0 |
0 |
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10 |
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2.07 |
2.07 |
63.3 |
-1.21 |
-0.82 |
10.1 |
95 |
2 |
6 |
5 |
1 |
0 |
0 |
0 |
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11 |
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2.27 |
2.26 |
68.9 |
-2.24 |
-0.68 |
23.5 |
88 |
8 |
7 |
9 |
1 |
1 |
2 |
0 |
SO4 404 D
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12 |
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2.04 |
2.04 |
73.8 |
-1.07 |
-0.78 |
9.5 |
96 |
0 |
9 |
6 |
2 |
1 |
0 |
0 |
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13 |
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2.24 |
2.27 |
79.8 |
-2.17 |
-0.68 |
21.5 |
90 |
9 |
8 |
11 |
2 |
1 |
2 |
0 |
SO4 404 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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