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PDBsum entry 1ng4

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1ng4 calculated with MOLE 2.0 PDB id
1ng4
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.52 33.0 -1.22 -0.48 18.1 82 4 3 1 3 0 2 0  
2 1.61 1.98 39.9 -0.69 -0.20 10.5 86 3 2 2 7 3 1 0  FAD 500 B PEO 501 B
3 1.95 2.74 45.4 -1.00 -0.26 14.0 83 5 3 2 6 4 1 0  FAD 400 A PEO 401 A
4 1.09 1.35 47.2 -1.99 -0.06 28.1 77 10 4 0 5 5 0 0  FAD 400 A PEO 401 A PO4 402 B
5 1.31 2.57 52.4 -1.89 -0.34 20.3 82 3 4 3 1 3 0 0  FAD 400 A
6 1.31 2.59 57.0 -2.78 -0.43 31.1 80 5 3 3 1 5 0 0  FAD 400 A
7 1.08 1.41 70.2 -2.12 -0.16 27.5 74 10 7 1 4 8 0 1  PO4 402 B FAD 500 B PEO 501 B
8 1.42 3.03 84.6 -1.68 -0.52 19.8 82 6 5 4 4 1 1 0  
9 1.15 1.15 85.2 -1.89 -0.18 23.9 78 9 4 3 6 8 0 1  FAD 400 A PO4 402 B FAD 500 B PEO 501 B
10 1.32 2.61 103.1 -1.83 -0.48 21.9 83 7 5 6 5 4 1 0  FAD 400 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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