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PDBsum entry 1n4d
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Tunnel analysis for: 1n4d calculated with  MOLE 2.0
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PDB id
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1n4d
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.63 |
1.65 |
20.3 |
-0.22 |
0.12 |
7.4 |
62 |
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0 |
1 |
2 |
4 |
5 |
1 |
0 |
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2 |
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1.14 |
1.27 |
21.9 |
3.04 |
0.91 |
1.1 |
80 |
0 |
1 |
3 |
11 |
0 |
0 |
0 |
MSE 1047 B
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3 |
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1.63 |
1.65 |
24.5 |
-0.04 |
0.23 |
6.4 |
65 |
0 |
1 |
3 |
5 |
5 |
0 |
0 |
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4 |
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1.26 |
3.26 |
25.6 |
1.09 |
0.37 |
1.7 |
76 |
0 |
0 |
4 |
8 |
4 |
2 |
0 |
MSE 1047 B
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5 |
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1.64 |
1.65 |
26.8 |
-0.24 |
0.31 |
3.1 |
63 |
0 |
2 |
3 |
4 |
5 |
3 |
0 |
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6 |
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1.64 |
1.65 |
29.9 |
-0.55 |
0.11 |
8.8 |
74 |
2 |
5 |
2 |
7 |
4 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program