PDBsum entry 1mst Go to PDB code:  Tunnel analysis for: 1mst calculated with MOLE 2.0 PDB id 1mst Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 1.56 15.0 -0.51 0.07 15.5 80 1 2 3 2 2 0 0   2 1.54 1.57 17.2 1.23 0.32 1.4 73 0 0 3 0 6 0 0   3 1.57 1.58 17.9 0.69 0.25 1.7 70 0 0 2 1 5 1 0   4 1.17 1.22 21.8 0.37 -0.16 2.9 81 1 0 2 2 3 0 0   5 1.54 1.56 23.0 0.90 0.34 1.6 72 0 0 3 1 6 1 0   6 1.49 1.55 23.7 0.14 0.26 9.0 83 1 2 4 4 2 0 0   7 1.46 1.61 33.8 0.96 0.32 1.9 81 1 0 5 3 5 0 1   8 1.54 1.56 33.9 -0.41 0.11 9.4 78 3 1 5 1 5 0 0   9 1.55 1.56 56.9 1.81 0.73 1.1 76 0 0 5 14 8 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.