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PDBsum entry 1msg

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1msg calculated with MOLE 2.0 PDB id
1msg
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 2.73 30.4 2.23 0.55 2.5 87 1 1 0 13 0 1 0  
2 1.89 3.44 33.3 -2.03 -0.63 16.3 77 4 1 3 0 0 2 1  
3 1.17 2.72 35.9 1.74 0.52 4.3 87 2 1 1 11 0 2 0  
4 1.31 2.53 39.4 3.64 1.16 0.2 87 0 0 0 25 0 0 0  
5 1.15 1.57 44.6 0.31 -0.03 4.9 89 2 0 3 8 0 2 0  
6 1.17 2.68 68.9 0.82 0.08 5.7 86 2 1 2 15 0 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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