PDBsum entry 1mnf Go to PDB code:  Pore analysis for: 1mnf calculated with MOLE 2.0 PDB id 1mnf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.61 3.08 25.9 -2.34 -0.37 35.4 83 4 4 1 3 0 0 0   2 1.31 2.12 38.6 -2.89 -0.75 34.0 81 5 6 3 2 0 0 0   3 2.74 2.93 40.7 -1.84 -0.62 23.3 89 6 7 4 3 0 0 0   4 2.73 2.93 40.8 -2.51 -0.68 25.4 90 3 7 4 2 0 1 0   5 2.61 4.61 81.8 -2.15 -0.51 30.4 81 16 12 2 4 1 1 0   6 2.58 4.56 81.9 -2.59 -0.55 32.4 79 13 10 2 3 1 2 0   7 1.67 3.89 118.5 -2.65 -0.72 29.8 83 14 15 8 4 1 1 0   8 1.97 1.97 121.7 -2.25 -0.59 29.7 81 18 15 6 4 2 2 0   9 1.27 2.23 122.0 -2.16 -0.54 29.8 85 11 14 6 8 2 2 0   10 2.59 4.80 139.2 -2.18 -0.48 28.9 80 18 18 4 4 4 2 0   11 1.88 1.99 148.0 -2.37 -0.63 29.2 83 22 20 10 5 1 2 0   12 1.38 2.31 151.3 -2.21 -0.47 30.2 84 18 20 7 9 2 2 0   13 1.89 2.02 159.1 -2.38 -0.61 31.9 86 20 23 9 8 0 1 0   14 1.31 2.74 165.2 -2.31 -0.57 28.5 82 22 18 7 6 2 3 0   15 1.25 2.17 165.6 -2.51 -0.52 33.3 82 23 24 7 8 2 2 0   16 1.65 3.95 184.8 -2.38 -0.65 28.6 85 22 22 12 8 2 1 0   17 1.97 2.12 187.1 -2.10 -0.56 28.8 84 26 24 10 8 2 2 0   18 2.02 2.05 187.3 -2.26 -0.59 30.1 85 27 26 11 8 1 2 0   19 1.63 4.27 199.2 -1.95 -0.41 27.0 82 22 13 12 18 1 0 0   20 1.39 2.26 205.3 -2.16 -0.40 26.7 79 22 18 5 8 6 6 0   21 1.43 2.59 210.2 -2.38 -0.56 31.6 86 23 27 12 13 0 1 0   22 1.19 2.25 222.2 -1.94 -0.46 25.5 82 24 21 9 8 6 3 0   23 1.65 3.91 223.8 -2.15 -0.58 28.6 85 26 27 13 11 3 1 0   24 1.68 4.28 232.4 -2.04 -0.39 27.4 83 27 14 15 19 0 0 0   25 1.32 2.29 262.4 -2.01 -0.50 27.4 83 30 27 10 14 4 3 0   26 1.26 2.03 274.6 -2.13 -0.49 28.6 82 30 30 10 12 5 3 0   27 1.35 2.62 286.6 -2.13 -0.54 28.8 84 37 32 11 13 3 3 0   28 1.78 1.88 317.1 -1.70 -0.47 22.2 83 23 23 12 10 5 5 0   29 1.44 2.25 351.8 -1.67 -0.45 22.2 84 27 26 14 12 6 5 0   30 1.80 1.80 383.4 -1.75 -0.49 23.4 84 31 31 16 14 6 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.