 |
PDBsum entry 1mjh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 1mjh calculated with  MOLE 2.0
|
PDB id
|
|
|
|
1mjh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
2 tunnels,
coloured by tunnel radius |
|
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.54 |
1.54 |
16.9 |
-0.24 |
-0.49 |
10.8 |
95 |
|
1 |
3 |
1 |
2 |
0 |
0 |
0 |
|
ATP 2001 A MN 4001 A
|
 |
|
2 |
 |
1.52 |
1.52 |
20.1 |
-1.06 |
-0.54 |
21.1 |
85 |
1 |
3 |
0 |
4 |
0 |
1 |
0 |
ATP 2001 A MN 4001 A
|
|
3 |
 |
1.42 |
1.42 |
17.8 |
-0.15 |
-0.46 |
10.4 |
95 |
2 |
3 |
2 |
4 |
0 |
3 |
0 |
ATP 3001 B MN 4002 B
|
|
4 |
 |
1.45 |
1.44 |
22.3 |
-1.12 |
-0.42 |
24.4 |
86 |
5 |
3 |
0 |
5 |
0 |
2 |
0 |
ATP 3001 B MN 4002 B
|
|
5 |
 |
1.20 |
1.45 |
15.8 |
-0.21 |
-0.11 |
9.9 |
79 |
2 |
1 |
0 |
3 |
2 |
0 |
0 |
|
 |
6 |
 |
1.27 |
1.45 |
22.7 |
0.21 |
0.11 |
6.7 |
72 |
1 |
1 |
0 |
4 |
6 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program