PDBsum entry 1mec Go to PDB code:  Tunnel analysis for: 1mec calculated with MOLE 2.0 PDB id 1mec Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 1.54 15.5 -1.26 -0.31 9.0 70 2 0 2 1 2 3 0   2 1.21 2.36 16.1 -0.99 -0.29 12.5 80 3 0 2 1 2 1 0  PO4 825 2 3 1.22 2.47 17.6 -0.17 0.18 10.8 71 2 0 2 2 4 2 0   4 1.10 1.10 20.8 -1.40 -0.42 8.8 80 2 0 4 1 2 0 0   5 1.36 1.36 15.7 -1.64 -0.80 10.6 95 1 2 3 0 0 0 0   6 1.36 1.36 15.9 -1.92 -0.86 14.8 89 2 2 3 0 0 0 0   7 1.24 1.31 16.0 -0.86 -0.44 7.2 74 2 1 3 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.