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PDBsum entry 1m32

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1m32 calculated with MOLE 2.0 PDB id
1m32
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.90 2.25 25.3 -0.49 0.01 11.2 84 0 3 4 3 2 0 0  
2 1.31 2.51 36.2 -1.09 -0.26 20.2 77 2 4 3 4 1 0 1  
3 2.29 2.48 40.0 -1.74 -0.41 17.1 79 2 5 5 2 3 0 1  
4 1.30 2.49 40.3 -2.13 -0.44 26.9 76 2 6 2 3 3 0 0  
5 1.32 2.43 41.8 -1.60 -0.31 22.8 82 4 4 3 7 1 0 0  
6 1.72 2.99 46.7 -1.87 -0.40 26.2 78 6 4 2 0 4 0 0  
7 1.90 2.07 51.5 -1.34 -0.35 19.6 79 5 6 1 2 4 0 0  
8 1.79 1.79 62.6 -1.39 -0.37 20.1 82 7 5 3 3 4 0 0  
9 1.19 1.19 66.9 -1.54 -0.50 12.9 80 9 1 12 0 4 4 2  PLP 4403 C POA 4603 C PO4 4604 C PLP 4404 D
10 1.91 2.10 71.1 -0.90 -0.16 15.7 80 4 4 2 5 5 0 0  
11 1.57 1.59 76.6 -1.33 -0.19 20.0 76 8 5 2 6 3 2 0  MSE 98 A MSE 102 A MSE 169 A PLP 4401 A POA 4601 A
12 1.55 1.62 79.3 -0.16 -0.23 10.9 86 3 3 4 13 1 1 0  MSE 177 F
13 1.24 1.23 87.3 -0.49 -0.14 13.7 81 7 4 4 18 4 3 0  MSE 98 A MSE 102 A MSE 169 A PLP 4401 A POA 4601
A MSE 95 B MSE 98 B MSE 102 B MSE 137 B
14 1.47 1.49 112.6 -0.25 -0.17 11.7 80 5 3 4 12 4 1 0  MSE 177 F
15 1.47 1.46 128.9 -0.17 -0.13 10.8 80 5 5 4 14 6 1 0  MSE 177 F
16 1.67 1.60 168.8 -1.91 -0.36 23.6 78 13 10 9 5 10 1 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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