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PDBsum entry 1llm
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Tunnel analysis for: 1llm calculated with  MOLE 2.0
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PDB id
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1llm
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.11 |
1.20 |
42.2 |
-2.13 |
-0.66 |
27.0 |
84 |
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6 |
3 |
1 |
1 |
1 |
0 |
0 |
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DC 3 A DC 4 A DA 5 A DC 6 A DG 7 A DC 8 A DT 21 B
DC 22 B DC 23 B DC 24 B DA 25 B
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2 |
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1.78 |
1.81 |
15.4 |
-2.32 |
-0.63 |
29.1 |
95 |
3 |
2 |
1 |
0 |
0 |
0 |
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DC 2 A DC 3 A DC 4 A DA 5 A DT 30 B
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3 |
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1.28 |
1.50 |
15.8 |
-0.95 |
-0.56 |
13.8 |
92 |
3 |
0 |
0 |
1 |
0 |
0 |
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DG 27 B DC 28 B
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4 |
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1.29 |
1.38 |
19.4 |
-1.02 |
-0.53 |
15.2 |
90 |
4 |
0 |
0 |
1 |
0 |
0 |
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DG 27 B DC 28 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program