PDBsum entry 1lkd Go to PDB code:  Tunnel analysis for: 1lkd calculated with MOLE 2.0 PDB id 1lkd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 1.56 16.7 0.32 0.40 11.0 85 2 0 2 5 3 1 0  BP6 300 A P6G 600 A 2 1.29 3.25 19.4 -1.85 0.19 28.6 85 5 2 2 2 2 1 0  BP6 300 A FE2 500 A P6G 600 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.