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PDBsum entry 1lj1
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Pore analysis for: 1lj1 calculated with  MOLE 2.0
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PDB id
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1lj1
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.34 |
2.54 |
28.6 |
-1.16 |
-0.44 |
20.1 |
87 |
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2 |
3 |
2 |
3 |
1 |
0 |
0 |
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2 |
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1.68 |
1.98 |
29.8 |
-0.72 |
-0.27 |
3.5 |
90 |
0 |
2 |
4 |
3 |
2 |
1 |
0 |
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3 |
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3.71 |
3.71 |
30.3 |
-1.55 |
-0.59 |
23.2 |
84 |
4 |
6 |
1 |
4 |
1 |
0 |
0 |
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4 |
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1.60 |
2.87 |
31.7 |
0.11 |
0.26 |
14.3 |
76 |
5 |
0 |
1 |
3 |
3 |
1 |
3 |
HEM 802 B HEM 803 B HEM 804 B
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5 |
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1.78 |
2.30 |
32.7 |
-0.70 |
-0.56 |
6.8 |
91 |
2 |
2 |
3 |
6 |
0 |
0 |
0 |
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6 |
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3.21 |
3.21 |
36.5 |
-2.23 |
-0.68 |
27.2 |
85 |
6 |
5 |
3 |
3 |
0 |
0 |
0 |
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7 |
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1.56 |
1.62 |
41.2 |
-0.24 |
-0.19 |
17.0 |
84 |
5 |
5 |
1 |
5 |
0 |
1 |
1 |
HEM 802 A HEM 803 A
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8 |
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1.77 |
2.26 |
42.1 |
-1.92 |
-0.56 |
28.7 |
82 |
6 |
8 |
2 |
5 |
0 |
0 |
0 |
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9 |
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1.77 |
2.27 |
44.5 |
-1.83 |
-0.57 |
22.9 |
85 |
6 |
5 |
3 |
4 |
0 |
0 |
0 |
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10 |
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1.53 |
1.78 |
57.2 |
-0.43 |
0.00 |
16.6 |
77 |
7 |
2 |
3 |
6 |
2 |
0 |
1 |
HEM 804 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program