PDBsum entry 1l7o

Tunnel analysis for: 1l7o calculated with

MOLE 2.0

PDB id

1l7o

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

11 tunnels, coloured by tunnel radius

7 tunnels, coloured by tunnel radius

7 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.86

1.86

21.5

-1.21

-0.32

21.2

76

3

3

1

2

2

1

0

MSE 543 B

2

1.46

1.62

22.6

-1.24

-0.37

20.6

78

3

3

1

2

2

1

0

MSE 543 B

3

1.39

2.14

26.5

-0.78

-0.23

14.5

80

1

3

2

1

2

0

0

4

1.86

1.86

27.0

-0.58

-0.31

12.9

87

1

3

2

6

2

0

0

5

1.39

2.13

27.5

-0.72

-0.23

13.8

83

1

3

2

1

2

0

0

6

1.46

1.62

28.0

-0.60

-0.28

14.0

88

1

3

2

6

2

0

0

7

1.14

1.78

15.9

0.97

0.25

9.4

87

2

1

0

4

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.