PDBsum entry 1l2d Go to PDB code:  Pore analysis for: 1l2d calculated with MOLE 2.0 PDB id 1l2d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.31 32.5 -1.14 -0.59 16.2 86 3 2 1 3 0 1 0  DG 1 B DT 2 B DT 20 C DC 21 C DT 22 C 2 1.31 1.30 35.2 -0.72 -0.52 10.0 83 1 0 2 3 1 1 0  DG 1 B DT 2 B DG 4 B DA 5 B DA 11 B DA 17 C HPD 18 C DG 19 C DT 20 C DC 21 C 3 1.32 1.32 35.3 -0.08 -0.50 5.7 85 1 0 1 3 0 1 0  DG 1 B DT 2 B DG 4 B DA 5 B DC 6 B DG 7 B DT 8 B DT 14 C DC 15 C DC 16 C DA 17 C DG 19 C DT 20 C DC 21 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.