PDBsum entry 1kye Go to PDB code:  Tunnel analysis for: 1kye calculated with MOLE 2.0 PDB id 1kye Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.73 15.0 -0.04 0.50 4.8 78 1 1 3 3 2 0 1   2 1.24 1.24 24.9 -1.05 -0.71 13.2 65 1 1 1 1 2 0 1  RUP 1 A 3 1.14 1.34 27.6 -0.62 -0.54 11.0 66 1 1 1 3 3 0 1  RUP 1 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.