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PDBsum entry 1kq4
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Tunnel analysis for: 1kq4 calculated with  MOLE 2.0
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PDB id
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1kq4
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
2.32 |
29.0 |
-1.47 |
-0.29 |
19.5 |
79 |
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4 |
1 |
2 |
1 |
4 |
0 |
0 |
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FAD 315 A
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2 |
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1.22 |
2.30 |
31.7 |
-1.28 |
-0.30 |
19.7 |
80 |
3 |
2 |
3 |
1 |
4 |
0 |
0 |
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3 |
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1.23 |
2.26 |
35.5 |
-0.87 |
-0.25 |
18.2 |
76 |
4 |
2 |
2 |
4 |
2 |
0 |
0 |
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4 |
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1.22 |
2.33 |
38.3 |
-1.44 |
-0.26 |
20.9 |
79 |
5 |
2 |
2 |
1 |
4 |
0 |
0 |
FAD 300 D
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5 |
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1.23 |
2.33 |
44.9 |
-1.69 |
-0.48 |
21.1 |
78 |
3 |
2 |
3 |
2 |
3 |
0 |
0 |
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6 |
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1.29 |
2.21 |
20.1 |
0.75 |
0.35 |
11.8 |
90 |
3 |
1 |
1 |
6 |
0 |
1 |
0 |
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7 |
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1.36 |
2.74 |
18.7 |
0.23 |
0.21 |
16.7 |
87 |
3 |
2 |
0 |
5 |
0 |
1 |
0 |
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8 |
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1.34 |
2.37 |
18.9 |
0.43 |
0.24 |
14.1 |
87 |
3 |
2 |
0 |
5 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program