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PDBsum entry 1kno
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Tunnel analysis for: 1kno calculated with  MOLE 2.0
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PDB id
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1kno
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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22 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
1.25 |
24.3 |
-0.37 |
0.53 |
8.4 |
61 |
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1 |
1 |
0 |
3 |
8 |
0 |
0 |
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PNP 553 F
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2 |
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1.21 |
1.28 |
96.7 |
-1.28 |
-0.41 |
13.1 |
89 |
7 |
4 |
10 |
6 |
4 |
2 |
0 |
PNP 553 F
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3 |
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1.14 |
1.96 |
24.3 |
-0.51 |
0.65 |
10.8 |
61 |
1 |
1 |
0 |
3 |
8 |
0 |
0 |
PNP 552 D
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4 |
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1.24 |
1.33 |
17.0 |
-0.02 |
-0.40 |
2.4 |
74 |
0 |
0 |
3 |
4 |
1 |
0 |
1 |
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5 |
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1.22 |
1.23 |
16.3 |
0.06 |
-0.52 |
5.4 |
87 |
0 |
2 |
2 |
3 |
0 |
1 |
0 |
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6 |
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1.20 |
1.20 |
19.2 |
0.29 |
-0.48 |
3.0 |
82 |
0 |
1 |
2 |
4 |
0 |
0 |
1 |
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7 |
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1.44 |
2.25 |
18.8 |
-0.32 |
-0.48 |
6.2 |
89 |
1 |
0 |
4 |
2 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program