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PDBsum entry 1knh
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Hydrolase PDB id
1knh
Contents
Protein chain
198 a.a.
Ligands
VAL-ALA-ALA-LEU-
TYR-LEU-VAL-CYS-
GLY-ALA
Metals
_CA
_ZN
procheck   Generate full PROCHECK analyses

PROCHECK summary for 1knh

Ramachandran plot

PROCHECK statistics

1. Ramachandran Plot statistics


                                         No. of
                                        residues     %-tage
                                         ------      ------
Most favoured regions      [A,B,L]          124       69.3%** 
Additional allowed regions [a,b,l,p]         45       25.1%          
Generously allowed regions [~a,~b,~l,~p]      5        2.8%          
Disallowed regions         [XX]               5        2.8%*  
                                           ----      ------
Non-glycine and non-proline residues        179      100.0%

End-residues (excl. Gly and Pro)              4

Glycine residues                             24
Proline residues                              1
                                           ----
Total number of residues                    208

Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good quality model would be expected to have over 90% in the most favoured regions [A,B,L].

2. G-Factors

                                                Average
Parameter                            Score       Score
---------                            -----       -----
Dihedral angles:-
     Phi-psi distribution            -1.23**
     Chi1-chi2 distribution          -0.58*     
     Chi1 only                       -0.36      
     Chi3 & chi4                      0.46      
     Omega                           -1.09**
                                                  -0.83*     
                                                  =====
Main-chain covalent forces:-
     Main-chain bond lengths         -1.03**
     Main-chain bond angles          -2.14**
                                                  -1.68**
                                                  =====

     OVERALL AVERAGE                              -1.14**
                                                  =====

G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is. 

Values below -0.5*  - unusual
Values below -1.0** - highly unusual
Important note: The main-chain bond-lengths and bond angles are compared with the Engh & Huber (1991) ideal values derived from small-molecule data. Therefore, structures refined using different restraints may show apparently large deviations from normality.

 

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