PDBsum entry 1kme Go to PDB code:  Tunnel analysis for: 1kme calculated with MOLE 2.0 PDB id 1kme Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.39 25.7 2.46 0.68 0.8 72 0 0 0 13 2 1 0  SQU 402 A 2 1.36 1.39 28.9 2.20 0.55 1.8 71 0 1 1 12 1 1 0  BGC 501 B 3 1.35 1.41 29.3 2.64 0.89 0.7 72 0 0 0 15 2 1 0  SQU 402 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.