PDBsum entry 1khv

Pore analysis for: 1khv calculated with

MOLE 2.0

PDB id

1khv

Pores calculated on whole structure

Pores calculated excluding ligands

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11 pores, coloured by radius

11 pores, coloured by radius

11 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

3.19

4.32

37.3

-1.38

-0.47

21.5

82

9

2

2

3

2

0

0

2

2.61

3.11

40.7

-0.98

-0.21

21.4

78

6

2

2

2

2

1

0

3

2.50

2.65

46.0

0.04

-0.04

10.4

85

6

0

4

6

1

2

0

4

1.43

1.52

49.6

-1.96

-0.48

25.9

84

7

6

3

3

1

0

0

LU 517 A

5

1.41

2.83

49.7

-2.78

-0.41

34.2

80

9

7

2

2

2

0

0

LU 517 A

6

2.52

2.91

70.0

-0.61

-0.30

15.9

83

8

2

4

7

2

1

0

7

1.43

1.51

78.6

-1.61

-0.32

25.1

82

7

7

4

4

2

1

0

LU 517 A

8

1.09

1.44

81.6

-1.99

-0.43

24.0

81

8

5

6

3

4

0

0

9

1.29

1.29

82.1

-2.05

-0.55

28.0

82

9

6

3

3

0

2

0

LU 517 A

10

1.09

1.42

95.8

-2.26

-0.37

26.9

79

13

5

5

6

4

0

0

11

1.27

1.28

103.5

-2.10

-0.44

28.1

78

15

8

3

5

2

2

0

LU 517 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.