 |
PDBsum entry 1khf
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1khf calculated with  MOLE 2.0
|
PDB id
|
|
|
|
1khf
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
2 pores,
coloured by radius |
|
3 pores,
coloured by radius
|
3 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.21 |
1.21 |
81.0 |
-0.61 |
-0.39 |
13.4 |
84 |
|
7 |
5 |
3 |
8 |
4 |
1 |
0 |
|
|
 |
|
2 |
 |
1.24 |
1.24 |
83.1 |
-2.18 |
-0.47 |
31.4 |
77 |
6 |
7 |
1 |
2 |
0 |
2 |
0 |
|
 |
3 |
 |
1.21 |
1.21 |
109.3 |
-0.98 |
-0.41 |
16.8 |
88 |
9 |
6 |
6 |
13 |
2 |
1 |
0 |
MN 701 A NA 702 A PEP 703 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program