PDBsum entry 1kgo Go to PDB code:  Tunnel analysis for: 1kgo calculated with MOLE 2.0 PDB id 1kgo Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 2.12 26.9 -0.45 -0.13 13.3 83 2 3 1 5 2 0 0   2 1.45 2.83 19.9 -0.13 -0.36 9.7 95 1 2 1 5 0 0 0   3 1.43 2.74 34.4 -0.41 -0.22 12.4 93 1 2 3 4 0 1 0   4 1.35 2.75 21.7 0.02 -0.10 10.7 95 1 2 2 6 0 1 0   5 1.62 2.38 21.8 0.27 -0.14 6.8 96 0 1 2 7 0 1 0   6 1.63 2.40 23.1 -0.43 -0.34 12.7 95 2 2 1 6 0 0 0   7 1.42 1.60 23.7 0.54 0.06 6.2 91 0 1 2 7 1 1 0   8 1.42 1.60 24.9 -0.31 -0.22 12.8 90 2 2 1 6 1 0 0   9 1.29 3.01 18.3 -1.13 -0.09 20.8 72 1 2 0 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.