PDBsum entry 1kf6 Go to PDB code:  Tunnel analysis for: 1kf6 calculated with MOLE 2.0 PDB id 1kf6 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.79 23.0 2.41 0.91 4.7 69 1 1 0 10 3 0 0   2 1.32 1.88 26.9 2.99 1.11 1.8 73 0 1 0 13 4 0 0   3 1.28 1.95 28.3 1.60 0.46 3.4 69 1 1 0 9 3 0 0   4 1.15 1.70 17.5 0.07 -0.32 8.7 95 2 2 2 4 0 0 0   5 1.34 1.50 16.5 -0.97 -0.24 7.3 83 1 0 4 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.