PDBsum entry 1k8h Go to PDB code:  Tunnel analysis for: 1k8h calculated with MOLE 2.0 PDB id 1k8h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.56 17.5 -0.22 0.22 12.9 81 2 0 1 1 1 1 0   2 1.29 1.56 18.7 -1.32 -0.17 18.5 90 2 0 2 1 0 1 0   3 1.42 1.52 20.9 1.53 0.44 3.7 89 1 0 1 7 0 0 0   4 1.43 1.53 22.5 1.39 0.37 4.5 86 1 1 1 6 0 0 0   5 1.29 1.57 33.8 -0.26 -0.14 7.0 86 2 1 4 6 1 1 0   6 1.29 1.46 34.0 -0.03 0.02 6.7 86 2 0 4 8 2 1 0   7 1.25 2.97 15.6 0.92 0.72 10.3 73 0 2 0 4 1 0 0   8 1.16 3.34 20.9 2.26 0.98 4.8 77 0 2 0 7 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.