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PDBsum entry 1k5m
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Tunnel analysis for: 1k5m calculated with  MOLE 2.0
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PDB id
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1k5m
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
2.97 |
26.1 |
-0.49 |
-0.51 |
8.6 |
95 |
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3 |
1 |
4 |
9 |
1 |
4 |
0 |
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2 |
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1.16 |
1.76 |
28.7 |
-0.24 |
-0.40 |
8.2 |
99 |
3 |
2 |
3 |
13 |
1 |
3 |
0 |
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3 |
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1.41 |
1.63 |
16.2 |
-1.32 |
-0.57 |
12.6 |
67 |
1 |
3 |
1 |
0 |
3 |
4 |
1 |
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4 |
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1.28 |
3.23 |
16.5 |
-1.77 |
-0.52 |
20.7 |
70 |
2 |
3 |
1 |
0 |
2 |
4 |
1 |
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5 |
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1.18 |
2.98 |
15.8 |
-0.92 |
-0.02 |
11.2 |
80 |
3 |
2 |
2 |
5 |
1 |
0 |
0 |
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6 |
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1.19 |
2.98 |
17.0 |
-0.71 |
0.02 |
10.5 |
80 |
3 |
2 |
2 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program