spacer
spacer

PDBsum entry 1k4c

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1k4c calculated with MOLE 2.0 PDB id
1k4c
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 1.70 27.8 -0.55 -0.52 9.7 97 2 0 3 3 0 0 0  
2 1.41 1.68 52.3 -0.93 -0.55 10.0 94 3 0 5 4 1 0 0  
3 1.20 1.73 59.2 -0.58 -0.15 7.3 78 2 1 3 6 2 3 0  
4 1.22 1.75 69.2 -0.61 -0.28 7.4 77 3 1 3 6 2 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer