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PDBsum entry 1k3o
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Tunnel analysis for: 1k3o calculated with  MOLE 2.0
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PDB id
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1k3o
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.62 |
3.00 |
28.1 |
-2.60 |
-0.53 |
30.2 |
85 |
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4 |
4 |
4 |
4 |
1 |
0 |
0 |
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2 |
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1.48 |
1.74 |
33.3 |
-1.02 |
-0.18 |
19.0 |
83 |
5 |
3 |
3 |
6 |
2 |
0 |
0 |
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3 |
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1.68 |
2.64 |
34.5 |
-1.36 |
-0.36 |
20.7 |
83 |
4 |
5 |
2 |
5 |
1 |
0 |
0 |
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4 |
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1.68 |
2.55 |
36.0 |
-1.01 |
-0.16 |
19.3 |
79 |
4 |
6 |
2 |
5 |
1 |
2 |
0 |
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5 |
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1.65 |
3.78 |
37.9 |
-0.85 |
-0.11 |
18.7 |
82 |
5 |
4 |
3 |
8 |
2 |
1 |
0 |
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6 |
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1.62 |
3.16 |
41.3 |
-3.00 |
-0.62 |
38.9 |
82 |
7 |
6 |
3 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program