PDBsum entry 1jz2 Go to PDB code:  Pore analysis for: 1jz2 calculated with MOLE 2.0 PDB id 1jz2 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   50 pores, coloured by radius 50 pores, coloured by radius 50 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.95 3.37 28.0 -1.84 -0.68 13.3 87 2 1 4 1 0 1 0   2 2.93 4.83 40.8 -1.55 -0.36 18.4 87 6 1 4 6 0 2 0   3 2.76 3.27 42.2 -1.81 -0.44 19.5 87 5 2 4 6 0 2 0   4 2.66 2.65 48.6 -1.36 -0.32 20.2 79 7 3 6 4 4 1 0   5 1.61 2.17 49.7 -0.94 -0.17 15.3 74 6 3 3 3 4 0 0  DMS 8403 A 6 2.50 2.65 53.8 -1.39 -0.36 18.6 80 9 4 7 5 4 1 0   7 2.65 2.65 57.6 -1.31 -0.36 17.7 83 8 3 9 4 4 1 0  DMS 8407 A 8 2.49 2.75 58.8 -1.54 -0.41 18.8 80 9 4 9 4 5 2 0  DMS 8407 B 9 1.30 2.46 59.9 -0.31 0.09 15.1 81 6 3 4 5 4 2 0   10 4.20 5.90 61.3 -2.06 -0.54 23.6 79 6 5 8 4 5 1 0  DMS 8407 A DMS 8407 B 11 2.66 2.65 63.3 -0.63 -0.13 14.0 78 8 5 6 7 6 1 0   12 1.69 2.24 64.4 -1.70 -0.45 18.9 79 7 4 7 3 3 0 0  DMS 8407 A DMS 8403 B 13 2.49 2.78 65.0 -1.20 -0.35 16.4 79 9 7 8 6 6 1 0  DMS 8407 A 14 2.67 4.42 77.3 -1.21 -0.31 16.2 80 9 8 7 9 6 2 0  DMS 8407 A 15 1.68 2.57 89.5 -1.96 -0.50 23.6 77 9 9 8 6 6 1 0  DMS 8407 A DMS 8403 B DMS 8407 B 16 1.67 2.16 32.5 -1.01 -0.16 11.7 64 5 2 2 2 4 2 0  DMS 8403 D 17 1.71 2.28 48.7 -0.90 -0.09 12.9 71 7 2 3 3 4 2 0  DMS 8403 C 18 2.43 3.45 51.7 -2.16 -0.64 17.7 91 5 4 6 5 0 2 0   19 3.83 4.01 53.4 -2.54 -0.69 27.8 80 4 7 6 2 2 2 0   20 4.19 5.90 53.6 -2.26 -0.64 24.4 79 4 6 8 3 4 1 0   21 2.07 2.10 60.7 -1.00 -0.34 14.3 79 6 2 9 6 4 2 1   22 3.82 4.00 60.7 -2.08 -0.63 23.4 81 6 6 5 2 2 1 0   23 4.19 4.21 61.7 -0.69 -0.33 11.3 80 6 5 5 7 5 0 0  DMS 8427 D 24 2.44 3.44 61.8 -1.13 -0.30 16.5 81 8 2 7 6 4 2 0   25 1.21 1.42 67.2 -1.60 -0.32 17.8 80 7 5 6 8 2 2 2   26 2.47 2.91 68.0 -1.16 -0.28 16.4 81 8 5 7 8 4 2 0  DMS 8427 D 27 2.74 3.03 70.3 -1.51 -0.40 17.4 80 8 5 10 7 4 3 0   28 2.44 3.44 72.1 -0.78 -0.15 14.1 79 8 4 9 8 7 2 0  DMS 8427 D 29 2.74 2.97 81.9 -1.15 -0.31 16.2 79 9 7 7 9 6 3 0  DMS 8427 D 30 2.46 2.82 82.3 -1.16 -0.35 15.4 79 8 9 8 8 7 3 0   31 2.47 2.88 83.3 -1.04 -0.33 15.3 79 9 8 4 7 7 2 0   32 1.30 1.42 88.8 -1.59 -0.37 16.2 85 10 5 10 9 2 3 2   33 1.24 1.42 90.1 -1.23 -0.38 13.6 81 5 2 9 5 2 2 2   34 1.17 1.42 99.8 -1.39 -0.32 17.5 78 12 6 10 9 5 4 2  DMS 8427 D 35 1.21 1.45 108.1 -1.12 -0.30 15.6 77 13 8 8 9 9 3 2   36 1.28 2.52 118.4 -1.15 -0.25 15.7 75 12 6 11 11 8 4 0  DMS 8403 C 37 2.61 3.70 26.1 -1.29 -0.29 16.5 80 4 4 4 3 1 2 1   38 2.60 3.13 34.2 -1.55 -0.37 18.6 82 4 5 5 4 1 2 1   39 1.72 1.89 55.8 -1.22 -0.32 12.3 77 2 4 8 2 2 6 2   40 1.75 1.86 63.5 -1.61 -0.41 14.5 77 5 5 8 3 2 7 2   41 1.68 1.82 73.9 -1.67 -0.41 16.2 76 5 8 7 4 2 7 2   42 1.71 1.84 81.7 -1.97 -0.50 18.2 78 8 9 7 5 2 8 2   43 1.48 3.87 26.2 -1.51 -0.10 21.3 79 4 3 3 5 3 0 0   44 2.76 3.37 32.2 -0.99 -0.20 15.1 79 5 3 5 3 2 2 1   45 1.47 3.86 40.1 -1.80 -0.20 22.8 78 6 3 4 5 5 0 0   46 1.24 1.53 41.4 -1.39 -0.13 18.6 73 5 3 2 4 1 4 1  DMS 8404 A DMS 8501 A 47 1.82 2.02 62.1 -1.56 -0.42 13.7 77 5 5 9 2 2 7 2   48 1.84 2.02 75.9 -2.03 -0.54 18.4 77 8 8 9 3 2 8 2   49 1.18 1.18 84.7 -1.34 -0.41 16.4 77 8 7 5 7 2 9 0  DMS 8404 A DMS 8501 A 50 1.20 1.19 100.8 -1.67 -0.51 18.0 79 9 9 8 7 1 10 1  DMS 8501 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.