PDBsum entry 1jw6 Go to PDB code:  Tunnel analysis for: 1jw6 calculated with MOLE 2.0 PDB id 1jw6 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 3.83 17.5 2.34 0.90 4.9 72 0 1 0 7 4 0 0   2 1.42 3.80 21.7 1.45 0.58 7.7 77 1 1 1 8 4 0 0   3 1.17 1.16 23.3 1.03 0.05 2.8 89 1 0 2 7 2 0 0   4 1.20 1.56 17.8 -1.15 -0.59 18.4 91 2 3 1 3 0 0 0  CA 241 A 5 1.19 1.53 21.0 -1.00 -0.54 17.7 97 0 3 2 3 0 0 0  CA 241 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.