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PDBsum entry 1js9
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Tunnel analysis for: 1js9 calculated with  MOLE 2.0
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PDB id
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1js9
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.76 |
2.18 |
22.7 |
3.44 |
1.09 |
1.3 |
81 |
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0 |
1 |
0 |
12 |
1 |
0 |
0 |
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2 |
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1.27 |
2.56 |
28.2 |
1.32 |
0.52 |
8.7 |
73 |
1 |
3 |
1 |
8 |
3 |
1 |
0 |
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3 |
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1.32 |
2.50 |
35.5 |
1.49 |
0.60 |
6.2 |
73 |
2 |
2 |
1 |
10 |
3 |
1 |
0 |
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4 |
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1.75 |
3.23 |
39.0 |
3.37 |
0.99 |
1.0 |
81 |
0 |
1 |
1 |
18 |
1 |
0 |
0 |
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5 |
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1.93 |
2.30 |
40.7 |
3.15 |
0.87 |
1.1 |
81 |
0 |
1 |
0 |
21 |
1 |
1 |
0 |
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6 |
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1.26 |
2.31 |
44.5 |
2.43 |
0.71 |
3.7 |
84 |
0 |
2 |
2 |
17 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program