PDBsum entry 1js6 Go to PDB code:  Tunnel analysis for: 1js6 calculated with MOLE 2.0 PDB id 1js6 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.34 30.7 -1.16 0.03 21.8 81 7 3 2 2 3 1 0  PLP 601 A 2 1.25 1.33 35.3 -1.55 -0.20 26.1 79 8 4 2 2 4 1 0  PLP 602 B 3 1.17 1.18 16.7 -0.04 -0.46 6.8 66 0 1 0 3 1 0 2   4 1.41 1.43 21.4 -1.12 -0.27 18.9 76 3 1 2 1 2 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.