PDBsum entry 1jnh Go to PDB code:  Pore analysis for: 1jnh calculated with MOLE 2.0 PDB id 1jnh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.32 4.30 27.1 -1.93 -0.81 12.0 92 1 2 6 0 0 1 0   2 3.32 4.32 29.2 -0.98 -0.55 8.9 89 1 2 5 2 1 1 0   3 1.34 1.38 32.0 -1.97 -0.57 18.9 79 2 2 3 3 1 2 0   4 3.33 3.33 33.3 -1.27 -0.18 8.8 74 2 1 1 2 3 2 0   5 2.36 2.36 55.7 -1.83 -0.51 15.9 76 2 3 4 2 3 3 0   6 1.77 2.21 56.2 -1.34 -0.05 11.4 78 3 1 3 1 5 1 0  ECO 352 D 7 1.75 2.20 96.9 -1.64 -0.25 15.9 82 4 7 4 1 7 1 0  ECO 354 H 8 1.75 2.20 101.5 -1.35 -0.29 12.6 85 4 2 5 1 4 2 0   9 2.37 2.36 102.2 -1.75 -0.53 14.9 77 5 3 5 2 4 3 0   10 2.65 4.82 26.3 -0.39 0.09 15.5 75 1 3 2 2 1 2 0   11 3.39 4.47 36.0 -1.60 -0.57 15.8 83 1 2 6 2 1 4 0   12 1.79 1.99 45.7 -1.48 -0.56 18.9 92 2 3 7 3 0 1 0   13 2.09 3.56 49.9 -2.21 -0.52 19.4 83 4 2 6 1 1 3 0   14 3.21 4.34 55.0 -1.63 -0.55 18.4 89 3 5 7 3 1 2 0   15 2.11 3.44 59.0 -2.07 -0.63 18.9 89 5 3 9 2 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.