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PDBsum entry 1jg3

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1jg3 calculated with MOLE 2.0 PDB id
1jg3
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.41 15.6 0.24 -0.16 8.8 86 1 1 2 4 0 0 0  
2 1.21 1.29 32.8 -0.62 -0.35 7.4 91 1 2 3 8 0 1 0  ADN 500 A
3 1.27 1.38 30.5 -0.50 -0.37 6.3 91 1 2 3 8 0 1 0  ADN 550 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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