PDBsum entry 1jff Go to PDB code:  Tunnel analysis for: 1jff calculated with MOLE 2.0 PDB id 1jff Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.35 1.35 33.9 -1.15 -0.36 14.8 84 3 4 5 5 2 0 0  GTP 500 A 2 1.30 1.30 36.1 -1.09 -0.39 13.6 85 3 4 5 6 2 0 0  GTP 500 A MG 501 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.