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PDBsum entry 1jbt
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Pore analysis for: 1jbt calculated with  MOLE 2.0
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PDB id
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1jbt
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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2 pores,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.55 |
1.55 |
32.5 |
-0.91 |
-0.34 |
16.6 |
89 |
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4 |
2 |
2 |
1 |
1 |
0 |
0 |
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C 5 C G 10 C G 14 C A 15 C A 17 C G 18 C G 19 C
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2 |
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1.53 |
1.53 |
36.4 |
-1.40 |
-0.38 |
17.9 |
87 |
4 |
3 |
4 |
1 |
1 |
1 |
0 |
G 14 D A 15 D A 17 D G 18 D G 19 D
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3 |
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1.18 |
1.24 |
45.9 |
-0.94 |
-0.51 |
12.7 |
87 |
3 |
0 |
2 |
1 |
1 |
0 |
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C 5 C G 10 C U 11 C A 12 C G 14 C G 18 C G 19 C K
31 C
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4 |
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2.93 |
2.93 |
50.1 |
-0.43 |
-0.80 |
3.8 |
72 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 1 C C 3 C U 4 C C 5 C C 6 C U 7 C G 10 C G 19 C
A 20 C A 21 C C 22 C C 23 C G 24 C G 25 C A 26 C
G 27 C K 30 C K 32 C C 1 D C 3 D U 4 D C 5 D C 6
D U 7 D G 10 D G 19 D A 20 D A 21 D C 22 D C 23 D
G 24 D G 25 D A 26 D G 27 D C 28 D K 31 D K 32 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program