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PDBsum entry 1jb0
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Pore analysis for: 1jb0 calculated with  MOLE 2.0
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PDB id
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1jb0
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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19 pores,
coloured by radius
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19 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.26 |
5.86 |
31.8 |
1.90 |
0.98 |
7.4 |
68 |
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2 |
0 |
1 |
10 |
5 |
0 |
0 |
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CLA 1103 A CLA 1111 A CLA 1112 A CLA 1117 A CLA
1119 A CLA 1122 A CLA 1123 A CLA 1125 A CLA 1127
A BCR 4003 A
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2 |
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1.16 |
1.50 |
33.3 |
-0.56 |
-0.11 |
13.9 |
80 |
4 |
2 |
2 |
2 |
2 |
2 |
0 |
CLA 1211 B
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3 |
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1.59 |
1.74 |
62.6 |
-0.32 |
0.16 |
11.9 |
75 |
4 |
1 |
2 |
7 |
4 |
1 |
1 |
CLA 1103 A CLA 1108 A CLA 1111 A CLA 1112 A CLA
1114 A BCR 4002 A BCR 4003 A
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4 |
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2.40 |
2.56 |
65.2 |
0.21 |
0.77 |
18.9 |
72 |
9 |
0 |
0 |
13 |
6 |
0 |
0 |
CLA 1102 A CLA 1103 A CLA 1104 A CLA 1108 A CLA
1109 A CLA 1111 A CLA 1117 A CLA 1127 A CLA 1128
A BCR 4003 A
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5 |
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1.37 |
2.28 |
91.2 |
0.68 |
0.73 |
10.9 |
79 |
7 |
2 |
4 |
22 |
8 |
0 |
0 |
CLA 1202 B CLA 1203 B CLA 1204 B CLA 1205 B CLA
1206 B CLA 1210 B CLA 1211 B CLA 1215 B CLA 1224
B CLA 1225 B CLA 1226 B BCR 4005 B BCR 4006 B LMG
5002 B BCR 4018 I BCR 4021 M
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6 |
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2.82 |
4.09 |
98.1 |
1.24 |
0.78 |
7.3 |
76 |
7 |
0 |
4 |
22 |
7 |
1 |
0 |
CLA 1101 A CLA 1103 A CLA 1104 A CLA 1105 A CLA
1106 A CLA 1107 A CLA 1108 A CLA 1111 A CLA 1117
A CLA 1126 A CLA 1127 A CLA 1128 A CLA 1140 A BCR
4003 A BCR 4011 A CLA 1012 B CLA 1229 B CLA 1230
B BCR 4014 B CLA 1301 F BCR 4012 J BCR 4015 J
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7 |
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1.19 |
1.49 |
104.1 |
0.81 |
0.68 |
8.1 |
76 |
6 |
0 |
4 |
22 |
10 |
2 |
0 |
CLA 1202 B CLA 1203 B CLA 1204 B CLA 1205 B CLA
1206 B CLA 1210 B CLA 1211 B CLA 1212 B CLA 1215
B CLA 1224 B CLA 1225 B CLA 1226 B BCR 4005 B BCR
4006 B LMG 5002 B BCR 4018 I BCR 4021 M
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8 |
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2.34 |
5.18 |
117.2 |
0.18 |
0.62 |
15.3 |
75 |
11 |
1 |
4 |
22 |
8 |
1 |
0 |
CLA 1101 A CLA 1102 A CLA 1103 A CLA 1104 A CLA
1105 A CLA 1106 A CLA 1107 A CLA 1109 A CLA 1126
A CLA 1127 A CLA 1128 A CLA 1140 A BCR 4003 A BCR
4011 A CLA 1012 B CLA 1229 B CLA 1230 B BCR 4014
B CLA 1301 F BCR 4012 J BCR 4015 J
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9 |
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1.42 |
2.49 |
135.4 |
0.59 |
0.68 |
14.1 |
73 |
11 |
2 |
5 |
22 |
17 |
1 |
0 |
CLA 1202 B CLA 1210 B CLA 1211 B CLA 1214 B CLA
1215 B CLA 1216 B CLA 1222 B CLA 1223 B CLA 1225
B CLA 1229 B CLA 1230 B CLA 1231 B CLA 1232 B CLA
1234 B CLA 1235 B CLA 1236 B BCR 4005 B BCR 4006
B BCR 4010 B BCR 4014 B BCR 4012 J BCR 4015 J CLA
1701 X
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10 |
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1.27 |
1.56 |
152.2 |
0.64 |
0.61 |
11.0 |
72 |
10 |
0 |
5 |
22 |
18 |
4 |
0 |
CLA 1202 B CLA 1210 B CLA 1211 B CLA 1212 B CLA
1214 B CLA 1215 B CLA 1216 B CLA 1222 B CLA 1223
B CLA 1225 B CLA 1229 B CLA 1230 B CLA 1231 B CLA
1232 B CLA 1234 B CLA 1235 B CLA 1236 B BCR 4005
B BCR 4006 B BCR 4010 B BCR 4014 B BCR 4012 J BCR
4015 J CLA 1701 X
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11 |
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1.53 |
2.48 |
151.0 |
0.47 |
0.74 |
8.3 |
66 |
7 |
0 |
5 |
17 |
21 |
4 |
0 |
CLA 1011 A CLA 1013 A CLA 1022 A CLA 1101 A CLA
1126 A CLA 1131 A CLA 1132 A CLA 1140 A BCR 4011
A CLA 1012 B CLA 1021 B CLA 1023 B CLA 1207 B CLA
1229 B CLA 1230 B CLA 1239 B BCR 4014 B BCR 4017
B CLA 1301 F BCR 4018 I BCR 4020 I BCR 4012 J BCR
4015 J
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12 |
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1.93 |
2.05 |
162.3 |
0.84 |
0.79 |
13.2 |
76 |
12 |
0 |
6 |
32 |
17 |
1 |
0 |
CLA 1202 B CLA 1203 B CLA 1204 B CLA 1205 B CLA
1206 B CLA 1210 B CLA 1214 B CLA 1215 B CLA 1216
B CLA 1222 B CLA 1223 B CLA 1224 B CLA 1225 B CLA
1226 B CLA 1229 B CLA 1230 B CLA 1231 B CLA 1232
B CLA 1234 B CLA 1235 B CLA 1236 B BCR 4005 B BCR
4010 B BCR 4014 B LMG 5002 B BCR 4018 I BCR 4012
J BCR 4015 J BCR 4021 M CLA 1701 X
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13 |
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1.52 |
2.47 |
168.6 |
0.59 |
0.72 |
7.2 |
71 |
7 |
0 |
6 |
26 |
19 |
3 |
0 |
CLA 1011 A CLA 1013 A CLA 1022 A CLA 1101 A CLA
1103 A CLA 1104 A CLA 1105 A CLA 1106 A CLA 1107
A CLA 1126 A CLA 1127 A CLA 1131 A CLA 1132 A CLA
1140 A BCR 4003 A BCR 4011 A CLA 1012 B CLA 1021
B CLA 1023 B CLA 1207 B CLA 1230 B CLA 1239 B BCR
4017 B BCR 4018 I BCR 4020 I BCR 4012 J
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14 |
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1.44 |
2.41 |
168.9 |
-0.63 |
0.13 |
17.8 |
80 |
14 |
11 |
9 |
17 |
13 |
0 |
0 |
CLA 1202 B CLA 1203 B CLA 1210 B CLA 1211 B CLA
1215 B CLA 1224 B CLA 1225 B CLA 1226 B BCR 4005
B BCR 4006 B LMG 5002 B
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15 |
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1.98 |
2.28 |
168.3 |
-1.08 |
-0.04 |
20.8 |
83 |
12 |
9 |
9 |
17 |
9 |
0 |
0 |
CLA 1203 B CLA 1204 B CLA 1205 B CLA 1206 B CLA
1224 B CLA 1225 B CLA 1226 B BCR 4005 B LMG 5002
B BCR 4018 I BCR 4021 M
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16 |
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1.48 |
1.61 |
180.5 |
-0.13 |
0.52 |
13.3 |
74 |
11 |
2 |
6 |
27 |
16 |
4 |
0 |
CLA 1022 A CLA 1131 A CLA 1132 A CLA 1237 A CLA
1023 B CLA 1203 B CLA 1204 B CLA 1205 B CLA 1206
B CLA 1207 B CLA 1224 B CLA 1225 B CLA 1226 B CLA
1238 B CLA 1239 B PQN 2002 B BCR 4005 B BCR 4017
B LMG 5002 B BCR 4018 I BCR 4020 I BCR 4021 M
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17 |
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1.22 |
1.39 |
183.7 |
0.08 |
0.57 |
12.3 |
72 |
13 |
4 |
6 |
28 |
20 |
4 |
0 |
CLA 1022 A CLA 1131 A CLA 1132 A CLA 1237 A CLA
1023 B CLA 1202 B CLA 1203 B CLA 1207 B CLA 1210
B CLA 1211 B CLA 1215 B CLA 1224 B CLA 1225 B CLA
1226 B CLA 1238 B CLA 1239 B PQN 2002 B BCR 4005
B BCR 4006 B BCR 4017 B LMG 5002 B BCR 4018 I BCR
4020 I
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18 |
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1.46 |
2.47 |
193.6 |
0.56 |
0.76 |
8.3 |
69 |
10 |
0 |
4 |
25 |
27 |
7 |
0 |
CLA 1011 A CLA 1013 A CLA 1022 A CLA 1101 A CLA
1102 A CLA 1109 A CLA 1131 A CLA 1132 A CLA 1138
A CLA 1139 A CLA 1140 A PQN 2001 A CLA 1012 B CLA
1021 B CLA 1023 B CLA 1207 B CLA 1229 B CLA 1239
B BCR 4014 B BCR 4017 B CLA 1301 F BCR 4018 I BCR
4020 I BCR 4013 J
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19 |
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1.81 |
2.11 |
240.1 |
-0.29 |
0.29 |
18.4 |
77 |
19 |
9 |
11 |
27 |
22 |
1 |
0 |
CLA 1202 B CLA 1203 B CLA 1210 B CLA 1214 B CLA
1215 B CLA 1216 B CLA 1222 B CLA 1223 B CLA 1224
B CLA 1225 B CLA 1226 B CLA 1229 B CLA 1230 B CLA
1231 B CLA 1232 B CLA 1234 B CLA 1235 B CLA 1236
B BCR 4005 B BCR 4010 B BCR 4014 B LMG 5002 B BCR
4012 J BCR 4015 J CLA 1701 X
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program