PDBsum entry 1ja2 Go to PDB code:  Pore analysis for: 1ja2 calculated with MOLE 2.0 PDB id 1ja2 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.55 28.4 2.13 0.59 1.2 79 0 0 2 8 1 0 2   2 1.23 1.77 29.1 1.76 0.98 2.7 74 1 0 0 10 4 0 0   3 1.22 1.61 33.6 0.91 0.49 2.6 72 1 0 2 8 3 0 2   4 1.20 1.77 34.0 0.80 0.67 4.8 70 2 1 0 7 3 0 0   5 1.28 1.61 39.3 1.51 0.55 2.5 71 1 1 1 10 2 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.