PDBsum entry 1j9c Go to PDB code:  Pore analysis for: 1j9c calculated with MOLE 2.0 PDB id 1j9c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.70 1.70 29.9 -0.87 -0.35 15.2 80 3 5 2 1 3 1 0   2 1.67 1.88 31.0 -1.15 -0.29 19.4 76 4 5 1 4 2 1 0   3 1.70 1.73 42.6 -0.74 -0.14 14.8 77 5 5 3 5 4 1 0   4 1.68 1.88 66.4 -1.76 -0.35 19.1 74 5 5 3 6 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.