PDBsum entry 1j7x Go to PDB code:  Tunnel analysis for: 1j7x calculated with MOLE 2.0 PDB id 1j7x Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 3.91 22.1 2.77 1.35 0.5 63 0 0 0 9 6 0 0   2 1.23 3.96 27.2 2.32 0.88 2.5 66 0 1 1 6 5 0 0   3 1.35 1.35 15.1 -0.40 -0.66 4.1 76 1 1 2 1 0 3 0   4 1.23 1.29 15.3 1.40 0.47 7.2 83 1 1 1 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.